On 12/04/2016 03:41 AM, Knoll, Max wrote:
Hi,
I'm stuck in the submission process and encounter the following error when
CHECK is performed (on oaxaca):
* checking PDF version of manual ... WARNING
LaTeX errors when creating PDF version.
This typically indicates Rd problems.
* checking PDF version of manual without hyperrefs or index ... ERROR
Re-running with no redirection of stdout/stderr.
Hmm ... looks like a package
Error in texi2dvi(file = file, pdf = TRUE, clean = clean, quiet = quiet, :
pdflatex is not available
Error in texi2dvi(file = file, pdf = TRUE, clean = clean, quiet = quiet, :
pdflatex is not available
Error in running tools::texi2pdf()
You may want to clean up by 'rm -rf /tmp/RtmpP89k5T/Rd2pdf1781b755e60d0'
(complete output:
http://bioconductor.org/spb_reports/cnAnalysis450k_buildreport_20161204025335.html)
This, however, occurs only on the Mac OS X (oaxaca) server, all builds and
checks on the windows machine
(and my local linux machine), do not show this error.
I suspect a missing folder in the PATH variable (as reported elsewhere), but I
should not be able to inject environmental variable
changes on the testing system.
Any ideas on how to proceed are appreciated.
I suggest ignoring this issue; it will be resolved.
Martin
Best
Max
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