This was accidentally taken off list. I don't have easy access to a devel
system at present so cannot investigate.
I did not check over the sessionInfo
Yes it produces the same error:
> c(GRanges(), GRanges())
Error in .Primitive("c")(<S4 object of class "Rle">, <S4 object of class
"Rle">) :
could not find symbol "recursive" in environment of the generic function
> traceback()
7: .Primitive("c")(<S4 object of class "Rle">, <S4 object of class "Rle">)
6: do.call(c, lapply(x, seqnames))
5: do.call(c, lapply(x, seqnames))
4: .unlist_list_of_GenomicRanges(args, ignore.mcols = ignore.mcols)
3: .local(x, ...)
2: c(GRanges(), GRanges())
1: c(GRanges(), GRanges())
---------- Forwarded message ----------
From: Ioannis Vardaxis <ioannis.varda...@math.ntnu.no>
Date: Thu, Oct 27, 2016 at 7:27 AM
Subject: Re: [Bioc-devel] Question about a package submission
To: Vincent Carey <st...@channing.harvard.edu>
R Under development (unstable) (2016-10-20 r71540)
Platform: x86_64-apple-darwin13.4.0 (64-bit)
Running under: OS X El Capitan 10.11
locale:
[1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
attached base packages:
[1] parallel stats4 stats graphics grDevices utils datasets
methods base
other attached packages:
[1] BSgenome.Hsapiens.UCSC.hg19_1.4.0 BSgenome_1.42.0
rtracklayer_1.30.4 Biostrings_2.43.0
XVector_0.15.0 MACPET_0.99.0
InteractionSet_1.3.0
[8] SummarizedExperiment_1.4.0 Biobase_2.35.0
GenomicRanges_1.27.2 GenomeInfoDb_1.11.0
IRanges_2.9.0 S4Vectors_0.13.1
BiocGenerics_0.21.0
loaded via a namespace (and not attached):
[1] Rcpp_0.12.7 BiocInstaller_1.25.2 plyr_1.8.4
iterators_1.0.8 bitops_1.0-6 tools_3.4.0
zlibbioc_1.21.0 rpart_4.1-10 goftest_1.0-3
mclust_5.2
[11] nlme_3.1-128 gtable_0.2.0 lattice_0.20-34
mgcv_1.8-15 foreach_1.4.3 Matrix_1.2-7.1
doMC_1.3.4 grid_3.4.0 XML_3.98-1.4
BiocParallel_1.9.0
[21] polyclip_1.5-6 ggplot2_2.1.0 deldir_0.1-12
tensor_1.5 codetools_0.2-15 Rsamtools_1.27.2
scales_0.4.0 intervals_0.15.1
GenomicAlignments_1.11.0 abind_1.4-5
[31] spatstat_1.47-0 colorspace_1.2-7 RCurl_1.95-4.8
munsell_0.4.3
>
--
Ioannis Vardaxis
Stipendiat IMF
NTNU
From: Vincent Carey <st...@channing.harvard.edu>
Date: Thursday 27 October 2016 at 13:23
To: Ioannis Vardaxis <ioannis.varda...@math.ntnu.no>
Cc: "bioc-devel@r-project.org" <bioc-devel@r-project.org>
Subject: Re: [Bioc-devel] Question about a package submission
sessionInfo()
[[alternative HTML version deleted]]
_______________________________________________
Bioc-devel@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/bioc-devel
