On 06/14/2016 10:10 PM, Kasper Daniel Hansen wrote:
In my case its an annotation package thats >100MB. But I could imagine
experiment package doing that as well.
very large packages don't play well with SVN or the repository, e.g.,
placing storage burden on repository mirrors. ExperimentHub might be a
better, emerging, solution...
Martin
On Tue, Jun 14, 2016 at 10:08 PM, Dan Tenenbaum <dtene...@fredhutch.org>
wrote:
Actually, here is the process for experiment packages:
https://github.com/Bioconductor/Contributions/blob/master/CONTRIBUTING.md#submitting-related-packages
Not sure what to do if there is a file > 100MB. There is git/github large
file storage but we don't explicitly support it.
Maybe it belongs in ExperimentHub instead?
Dan
----- Original Message -----
From: "Dan Tenenbaum" <dtene...@fredhutch.org>
To: "Kasper Daniel Hansen" <kasperdanielhan...@gmail.com>
Cc: "bioc-devel" <bioc-devel@r-project.org>
Sent: Tuesday, June 14, 2016 7:02:25 PM
Subject: Re: [Bioc-devel] submitting annotation and data package
For annotation packages, see this:
https://bioconductor.org/developers/package-submission/#annotation-packages
For experiment packages, I'm not sure.
Dan
----- Original Message -----
From: "Kasper Daniel Hansen" <kasperdanielhan...@gmail.com>
To: "bioc-devel" <bioc-devel@r-project.org>
Sent: Tuesday, June 14, 2016 6:28:06 PM
Subject: Re: [Bioc-devel] submitting annotation and data package
Also, just a point, GitHub does not allow files >100MB. That is a
non-issue (I hope) for software packages, but could be hit by annotation
packages, including one I maintain
On Tue, Jun 14, 2016 at 8:53 PM, Kasper Daniel Hansen <
kasperdanielhan...@gmail.com> wrote:
Should I submit a new annotation and a new data package through the new
GitHub interface, or use something differently?
Best,
Kasper
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