I am working on getting a package ready for Bioconductor called motifbreakR.

http://bioconductor.org/spb_reports/motifbreakR_0.99.7_buildreport_20150818123558.html#moscato1_buildsrc_anchor

This is the build report. My package has as part of it’s plotting function, the 
necessity of producing a temporary file that is read back in. This is likely 
where the issue lies, but I’m not entirely sure about the build environment, 
and where exactly the permissions issue lies. I am able produce the package on 
a local windows install; this includes the generation of the vignette during 
the build.

Thanks for looking at this.

Simon Gert Coetzee
Research Biostatistician
Department of Biomedical Sciences
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Cedars-Sinai Medical Center
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