Hi Leo,
Thanks for reporting this. It was missed by the build system (and
myself!) because the package was already installed. Should be fixed in
1.1.16.
futile.logger (and others) were moved to Suggests to lighten the load of
the NAMESPACE. Logging isn't technically turned on until the cluster is
started with bpstart(), however, futile.logger is used to check the
threshold when the class is instantiated. This step is important in
class validation so I've moved futile.logger back to Imports.
Valerie
On 03/12/2015 08:35 PM, Leonardo Collado Torres wrote:
Hi,
I noticed that BiocParallel::SnowParam() changed. It now uses the
futile.logger package, but it's only suggested by BiocParallel as seen here
https://github.com/Bioconductor/BiocParallel/blob/master/DESCRIPTION#L19
This leads to some errors as shown at
https://travis-ci.org/lcolladotor/derfinder/builds/54192145#L3570-L3571
Hopefully futile.logger can be imported. I mean, hopefully selectively
importing futile.logger is a quick task.
Thanks,
Leo
[[alternative HTML version deleted]]
_______________________________________________
Bioc-devel@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/bioc-devel
--
Computational Biology / Fred Hutchinson Cancer Research Center
1100 Fairview Ave. N, Seattle, WA 98109
Email: voben...@fredhutch.org
Phone: (206) 667-3158
_______________________________________________
Bioc-devel@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/bioc-devel
