On 02/10/2015 01:51 AM, Guangchuang Yu wrote:
Dear all,
I found the vignette of my package DOSE is missing,
http://bioconductor.org/packages/devel/bioc/html/DOSE.html.
I am pretty sure the I don't have .Rbuildignore file and the vignette,
DOSE.Rnw, passing the build with knit2pdf.
Not only it is missing in the bioconductor website, but also missing after
R CMD build in my computer.
Does anyone have any idea?
Hi Guangchuang --
If I do
DOSE/vignettes$ R CMD Sweave DOSE.Rnw
Bioconductor version 3.1 (BiocInstaller 1.17.5), ?biocLite for help
Error: Vignette engine package not specified
Execution halted
Hmm.... I think in your LaTeX document you need '::' rather than ':' in
% \VignetteEngine{knitr::knitr}
Also, the DOSE.pdf should be removed from the vignette/ directory (it gets
built!).
Martin
Best Regards,
Guangchuang Yu
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