Hi Raffaele, See here:
http://bioconductor.org/packages/release/data/annotation/html/BSgenome.Hsapiens.NCBI.GRCh38.html Best, Jim On Tue, Dec 2, 2014 at 9:10 AM, Raffaele Adolfo Calogero < raffaele.calog...@unito.it> wrote: > Dear Bioc Team, > I am the maintainer of chimera package. > Recently some of the users asked for the possibility to use chimera with > fusions detected on hg38 human genome. > I checked for the availability of hg38 as BSgenome but I did not find it in > Bioc repository, as instead there is TxDb.Hsapiens.UCSC.hg38.knownGene. I > would like to know if it is planned the release of hg38 as BSgenome, maybe > in the next Bioc release. > In case it is not planned could please suggest me what to read to build it? > Cheers > Raffaele > > -- > ---------------------------------------- > Prof. Raffaele A. Calogero > Bioinformatics and Genomics Unit > MBC Centro di Biotecnologie Molecolari > Via Nizza 52, Torino 10126 > Tel. ++39 0116706457 > Fax ++39 0112366457 > Mobile ++39 3333827080 > email: raffaele.calog...@unito.it > raffaele.calog...@gmail.com > www: http://www.bioinformatica.unito.it > > [[alternative HTML version deleted]] > > _______________________________________________ > Bioc-devel@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/bioc-devel > -- James W. MacDonald, M.S. Biostatistician University of Washington Environmental and Occupational Health Sciences 4225 Roosevelt Way NE, # 100 Seattle WA 98105-6099 [[alternative HTML version deleted]] _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
