This was a bug in BatchJobs::waitForJobs(). We now throw an error if jobs "disappear" due to a faulty template file. I'd appreciate if you could confirm that this is now correctly catched and handled on your system. I furthermore suggest to replace NULL with NA_character_ in .convertToSimpleError().
I will upload a fixed BatchJobs to CRAN ASAP (but last upload was the day before yesterday, thus we have to wait a few days). Best, Michel _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel