Thanks, should be fixed in devel S4Vectors.
On Mon, Jul 28, 2014 at 6:46 PM, Hervé Pagès <hpa...@fhcrc.org> wrote: > Hi Michael, > > Works if the DataFrame has columns: > > library(IRanges) > DF1 <- DataFrame(aa=letters[1:4]) > DF0 <- DF1[0] > > Then: > > > DF1 > DataFrame with 4 rows and 1 column > aa > <character> > 1 a > 2 b > 3 c > 4 d > > > DF0 > DataFrame with 4 rows and 0 columns > > > subset(DF1, c(FALSE, TRUE)) > DataFrame with 2 rows and 1 column > aa > <character> > 1 b > 2 d > > OK. But: > > > subset(DF0, c(FALSE, TRUE)) > Error in NSBS(i, x, exact = exact, upperBoundIsStrict = !allow.append) : > subscript is a logical vector with out-of-bounds TRUE values > > This currently causes subset() to fail on a GRanges object with no > metadata cols. > > Thanks, > H. > > > -- > Hervé Pagès > > Program in Computational Biology > Division of Public Health Sciences > Fred Hutchinson Cancer Research Center > 1100 Fairview Ave. N, M1-B514 > P.O. Box 19024 > Seattle, WA 98109-1024 > > E-mail: hpa...@fhcrc.org > Phone: (206) 667-5791 > Fax: (206) 667-1319 > > _______________________________________________ > Bioc-devel@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/bioc-devel > [[alternative HTML version deleted]]
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