Hi Julian, There was a bug after an update on the epiviz web app. A fix is now available on both devel and release github repos: https://github.com/epiviz/epivizr https://github.com/epiviz/epivizr-release
Also available on svn and will be available on next build. Thanks! Hector PS. Let me know how things go! On Wed, Jun 4, 2014 at 2:41 PM, Julian Gehring <julian.gehr...@embl.de> wrote: > Hi, > > When I try to start epivizr with a defined region of interest, the region > is always mapped to the default chromosome 11. > > library(epivizr) > mz = startEpiviz(chr = "chr2", start = 1e5, end = 2e5) > > yields the URL > > > http://epiviz.cbcb.umd.edu/index.php?websocket-host[]=ws://localhost:7312&debug=false&chr=chr2&start=100000&end=200000&settings=default&ws=Y8kWxCO2Ajn&seqName=chr11&; > > and a view that is centered around chr11:100000-200000. It seems that the > defaults overwrite the chromosome location, both in the latest version of > 'epivizr' of bioc-release and bioc-devel. Am I missing an important option > to overwrite the default properly? > > Best wishes > Julian > [[alternative HTML version deleted]] _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
