Mr Morgan, I'm afraid the issue is not completely over. Among the packages that were failing installation, all now success after your guidance but three remain failing. Here are excerpts of the dumps:
ChIPseqR gcc -m64 -std=gnu99 -shared -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -m64 -mtune=generic -flto -fpic -Wl,-z,relro -o ChIPseqR.so startScore.o -L/usr/lib64/R/lib -lR installing to /usr/lib64/R/library/ChIPseqR/libs ** R ** inst ** preparing package for lazy loading Error in dyn.load(file, DLLpath = DLLpath, ...) : unable to load shared object '/usr/lib64/R/library/fBasics/libs/fBasics.so': libRblas.so: cannot open shared object file: No such file or directory IdMappingAnalysis ** preparing package for lazy loading Error in dyn.load(file, DLLpath = DLLpath, ...) : unable to load shared object '/usr/lib64/R/library/mclust/libs/mclust.so': libRlapack.so: cannot open shared object file: No such file or directory RamiGO: ** preparing package for lazy loading Error : .onLoad failed in loadNamespace() for 'igraph', details: call: dyn.load(file, DLLpath = DLLpath, ...) error: unable to load shared object '/usr/lib64/R/library/igraph/libs/igraph.so': libRlapack.so: cannot open shared object file: No such file or directory Perhaps it's better to get someone with a Fedora 20 that understand better than I do debugging package installation, since I'm not far abusing your patience. Eric. _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
