----- Original Message ----- > From: "Dan Tenenbaum" <dtene...@fhcrc.org> > To: "J. Hettling" <j.hettl...@vu.nl> > Cc: bioc-devel@r-project.org > Sent: Thursday, February 13, 2014 8:08:16 AM > Subject: Re: [Bioc-devel] daily build problems, how to debug? > > > > ----- Original Message ----- > > From: "J. Hettling" <j.hettl...@vu.nl> > > To: bioc-devel@r-project.org > > Sent: Thursday, February 13, 2014 4:29:21 AM > > Subject: [Bioc-devel] daily build problems, how to debug? > > > > Dear Bioconductor developers, > > > > since updating our package 'BiGGR' on the development branch, the > > daily built gives errors > > (see > > http://www.bioconductor.org/checkResults/2.14/bioc-LATEST/BiGGR/zin2-buildsrc.html). > > > > However, on both of my machines R CMD build and R CMD check run > > without problems (one of them actually running the same OS version > > as zin2). > > I see that there are some Latex errors in the vignette building, > > but > > cannot really make sense of it. > > > > My current approach is trial-and-error, I change what I suspect > > would > > cause the error, update the devel package and wait a day until it > > is > > build again. > > > > Is there a better way to debug this? > > > > Looks like you had an unnecessary Makefile in vignettes/. It wasn't > doing anything that R does not automatically do. I removed it and > the package now builds successfully, so I went ahead and committed > that change. >
This will not be reflected on the build system until tomorrow morning (Seattle time). Dan > Dan > > > > > Kind Regards > > > > Hannes > > > > [[alternative HTML version deleted]] > > > > _______________________________________________ > > Bioc-devel@r-project.org mailing list > > https://stat.ethz.ch/mailman/listinfo/bioc-devel > > > _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
