Something could go into BatchJobs, but it would be nice to have abstract support for it at the level of BiocParallel.
On Thu, Nov 14, 2013 at 6:32 AM, Vincent Carey <st...@channing.harvard.edu>wrote: > Streamer package has DAGTeam/DAGParam components that I believe are > relevant. > An abstraction of the reduction plan for a parallelized task would seem to > have a natural > home in BatchJobs. > > > On Thu, Nov 14, 2013 at 8:15 AM, Michael Lawrence < > lawrence.mich...@gene.com> wrote: > >> Hi guys, >> >> We often need to iterate over the cartesian product of two dimensions, >> like >> sample X chromosome. This is preferable to nested iteration, which is >> complicated. I've been using expand.grid and bpmapply for this, but it >> seems like this could be made easier. Like bpmapply could gain a CARTESIAN >> argument with a list of arguments to multiply? But somehow you would want >> the resuls combined in a way that does not require generating the product >> manually. Maybe a list of lists? We need to think more about the >> combination step, in general. >> >> Michael >> >> [[alternative HTML version deleted]] >> >> _______________________________________________ >> Bioc-devel@r-project.org mailing list >> https://stat.ethz.ch/mailman/listinfo/bioc-devel >> > > [[alternative HTML version deleted]] _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
