On 07/16/2013 07:11 AM, Ou, Jianhong wrote:
Hi Martin,

This is a great package. When I insert the figure to the vignettes, the
codes will not run two times. Great!

One question is that how could I show "@" in the vignettes?
And is there any methods to draw multiple figures in one chunk and then
insert them separately?

Thanks for the comments, hopefully we can make the package a bit better.

I think \Rcode{x@y} does the right thing?

The package doesn't provide any special facilities for drawing multiple figures in one chunk then inserting them separately; One approach is

<<fig>>=
pdf("fig-1.pdf"); plot(1:10); invisible(dev.off())
pdf("fig-2.pdf"); plot(10:1); invisible(dev.off())
@

\begin{figure}
  \centering
  \includegraphics[width=.45\textwidth]{fig-1}
  \includegraphics[width=.45\textwidth]{fig-2}
  \caption{Some figures}
  \label{fig:figs}
\end{figure}

Martin


Yours sincerely,

Jianhong Ou

LRB 670A
Program in Gene Function and Expression
364 Plantation Street Worcester,
MA 01605




On 7/14/13 11:23 AM, "Martin Morgan" <mtmor...@fhcrc.org> wrote:

Developers --

Sweave-style vignettes often include copy-pasted versions of basic LaTeX
macros
and other commands. We've created the BiocStyle package to make it easy
to add
these macros, and a consistent style, to Bioconductor vignettes -- just
add
Suggests: BiocStyle to your package DESCRIPTION, and the following lines
inside
the preamble (between \documentclass{article} and \begin{document}) of
your vignette

<<style, eval=TRUE, echo=FALSE, results=tex>>=
BiocStyle::latex()
@

Details, including illustration of macros and styles, are in the package
vignette


http://bioconductor.org/packages/devel/bioc/vignettes/BiocStyle/inst/doc/L
atexStyle.pdf

and on the ?latex help page. Suggestions welcome. Perhaps this can be
extended
for non-Sweave vignettes.

Martin
--
Computational Biology / Fred Hutchinson Cancer Research Center
1100 Fairview Ave. N.
PO Box 19024 Seattle, WA 98109

Location: Arnold Building M1 B861
Phone: (206) 667-2793

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--
Computational Biology / Fred Hutchinson Cancer Research Center
1100 Fairview Ave. N.
PO Box 19024 Seattle, WA 98109

Location: Arnold Building M1 B861
Phone: (206) 667-2793

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