I've been having this problem for a while with the package:
tim@tim-ThinkPad-T420s:~/bioc-devel$ more
/home/tim/bioc-devel/AnnotationHubServer.Rcheck/00install.out
* installing *source* package AnnotationHubServer ...
** R
** inst
** preparing package for lazy loading
Error in match.fun(FUN) : node stack overflow
ERROR: lazy loading failed for package AnnotationHubServer
* removing
/home/tim/bioc-devel/AnnotationHubServer.Rcheck/AnnotationHubServer
This morning it dawned on me that perhaps installing AnnotationHubData was
a prerequisite, so I gave it a shot:
[1] Creating log directory /home/tim/.AnnotationHubData
* DONE (AnnotationHubData)
tim@tim-ThinkPad-T420s:~/bioc-devel$ R CMD INSTALL AnnotationHubServer/*
installing to library /usr/lib64/R/library
* installing *source* package AnnotationHubServer ...
** R
** inst
** preparing package for lazy loading
rmongodb package (mongo-r-driver) loaded
Use 'help("mongo")' to get started.
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
rmongodb package (mongo-r-driver) loaded
Use 'help("mongo")' to get started.
* DONE (AnnotationHubServer)
So perhaps that should go in the DESCRIPTION file for the latter, along
with a revision number? It would seem that I must have had
AnnotationHubData from an older vintage installed, but said older vintage
was not satisfactory, thus, error.
Anyways. Just in case anyone else has the same issue, here it is.
--
*A model is a lie that helps you see the truth.*
*
*
Howard Skipper<http://cancerres.aacrjournals.org/content/31/9/1173.full.pdf>
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