I think you don't need to change anything. affyPLM needs to import normalize appropriately given the recent change to include this in BiocGenerics. Presumably this will happen soon.
On Tue, Apr 30, 2013 at 3:48 AM, Leif Väremo <var...@chalmers.se> wrote: > Hi, > > My package piano has had a build error for some days now in the devel > version with the following error: > > Error : objects .__T__normalize:BiocGenerics, normalize are not > exported by namespace:affy > > I have noted that these packages also get this error during build: > AffyExpress, affylmGUI and affyPLM. > > Package affy itself is built but has some errors/warnings during CHECK: > > * checking for code/documentation mismatches ... WARNING > Functions or methods with usage in documentation object 'normalize' but not > in code: > normalize > > normalizing...Error in get(name, envir = asNamespace(pkg), inherits = > FALSE) : object 'normalize' not found > > Can someone please help me as to whether I should make some changes to my > package to avoid the build error? > > Kind regards > Leif > ____________________________________________________ > > *Leif Väremo*,* *PhD student > > *Systems and Synthetic Biology* > Department of Chemical and Biological Engineering > Chalmers University of Technology > Kemivägen 10, SE-412 96 Göteborg > > [[alternative HTML version deleted]] > > > _______________________________________________ > Bioc-devel@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/bioc-devel > > [[alternative HTML version deleted]]
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