Hi Fasta file is just a text file, so you can read it as any other text file using perl. The name usually is somthing.fasta, but you can keep the old name (output.txt)
The format is: > sequence description sequence (60 letters) sequence (60 letters) For more info, reed this link http://en.wikipedia.org/wiki/FASTA_format 2007/11/10, Spiros Denaxas <[EMAIL PROTECTED]>: > > On Nov 8, 3:42 am, [EMAIL PROTECTED] (Auxence Sima) wrote: > > i have Sequence Data in a file that i named " OUTPUT.TXT",and hereis my > question. I would like to create a FASTA data file, and i wonder how to > process. do i have to just take out the info inside the OUTPUT.TXT, and > keep only Sequences, and then put them ina FASTA format?? DO i keep the > same name for the data file??? > > > > the second question is : After i have created the fasta file, will i > read the info just the same way i would with TXT file??? > > > > __________________________________________________ > > Do You Yahoo!? > > Tired of spam? Yahoo! Mail has the best spam protection > aroundhttp://mail.yahoo.com > > You may also want to check: > > the BioPerl project @ http://www.bioperl.org/wiki/Main_Page > the BioPerl mailing list @ > http://lists.open-bio.org/mailman/listinfo/bioperl-l > > > -- > To unsubscribe, e-mail: [EMAIL PROTECTED] > For additional commands, e-mail: [EMAIL PROTECTED] > http://learn.perl.org/ > > > -- Pau Marc Muñoz Torres Laboratori de Biologia Computacional Institut de Biotecnologia i Biomedicina Vicent Villar Universitat Autonoma de Barcelona E-08193 Bellaterra (Barcelona) telèfon: 93 5812807 Email : [EMAIL PROTECTED]
