Hello again,
I have no background in genetic analysis but it looks like there is so
much effort going on in the Bio:: modules. There is a module called
Bio::SeqFeature::Similarity that might be doing just what you want. But
then again, it may not :-)
Hope this helps,,,
Aziz,,,
In article <[EMAIL PROTECTED]>, "Bob
Mangold" <[EMAIL PROTECTED]> wrote:
> BTW, if it helps at all, I'm doing genetic analysis of whole genomes,
> hence the 4.5 million long string.
>
> -Bob
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