The logic is that i have file A which has some names and file B which has values for each name in file A and some extra values. I want to make a script which gives me the values from file B corresponding to all the names given in file A. My files look like -
*File A-* >PSUB.GBD61H402FPT34:0-372 >PSUB.GBD61H401EQ8PG:0-365 >PSUB.GBD61H401AV35C:0-423 >PSUB.GBD61H401EWL7A:0-442 >PSUB.GBD61H401CWYC8:0-284 *File B-* >PSUB.GBD61H402FPT34:0-372 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNCATTTCCTTGAGTATTAGGCCATTCATGCTGTCAATTTTCTTAACT ATTTGGAAATCCTAGTTGTACAAGATGGCCTTTTTCCCACCTGTATTTGC TTGGTCTGTGTACTGTAGTCTGCCTCTGCAAATGTTGTGGGAGGACTAAA TGTGGCGGGGGTGGGCTGACAG >PSUB.GBD61H401EQ8PG:0-365 GTTCTGTATTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXGTTGTGTATTAAAAACAATGCA ATTCTTGGGCAAAGCAGTATGATTGGTTGTGTTTAAGATATCATAGATTC TGCATACCAGAGCATTTGAGTAAGAAATGCATTTACTAGTAATTATTTTC ACCCCTTAAAGAAGT >PSUB.GBD61H401DZU65:0-306 TAAACCATGGAGATCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXCAAAAGAGGGATATTTAGTTA GAAAAAAAACCCCACATGGAAGTAATTTTAAACGACCCTGTTGATTTGTT ATACAG >PSUB.GBD61H401DLDLT:0-387 ATTTTAAATGTACATCTCATTTAAAGGATTTTTTCCCTAAAGAATTGGAA ACCGXXXXXXXXXXXXXXX Can anyone please help me write a script in python to accomplish this task. Thanks. Ananya On Sat, Sep 17, 2011 at 2:22 PM, Gora Mohanty <g...@mimirtech.com> wrote: > On Sat, Sep 17, 2011 at 9:33 PM, Ananya Sharma <as1...@msstate.edu> wrote: > > I am trying to look up each value from file A and loop it through file B. > As > > i already said that I am new in python programming so this is what I > could > > come up with. > > Um, the code is quite far from accomplishing that. While > I am sure that people could write this function for you, in > order for you to learn, it would be best if you could explain > your logic in words, or pseudo-code. You do not need to > know Python in order to come up with this logic. > > > And this is the output of an algorithm I use in my research so > > its not a part of any homework assignment. > > OK. > > Regards, > Gora > _______________________________________________ > BangPypers mailing list > BangPypers@python.org > http://mail.python.org/mailman/listinfo/bangpypers > _______________________________________________ BangPypers mailing list BangPypers@python.org http://mail.python.org/mailman/listinfo/bangpypers
